close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2790Unnamed protein product; Similar to probable probable N-acetylmuramoyl-L-alanine amidase YbjR precursor of Escherichia coli. (273 aa)    
Predicted Functional Partners:
thiE
Thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
 
      0.613
spr
Lipoprotein spr precursor.
  
  
 0.595
mlc
Making large colonies protein.
     
 0.546
plu1463
Collar domain-containing protein; Unnamed protein product; Weakly similar to DNA inversion product, tail fiber protein homolog from lambdoid prophage.
     
 0.528
plu4229
MFS domain-containing protein; Unnamed protein product; Some similarities with multidrug-resistance protein. Putative transmembrane protein.
      
 0.528
plu1125
Unnamed protein product; Similar to integrase/recombinase; Belongs to the 'phage' integrase family.
      
 0.526
ISPlu16B
Transposase, IS630 family.
      
 0.526
ISPlu16A
Transposase, IS630 family.
      
 0.526
plu3688
Unnamed protein product; Similar to integrase/recombinase.
      
 0.526
plu4122
Unnamed protein product; Hypothetical gene.
     
 0.526
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.