Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| helD | holD | plu1779 | plu4251 | DNA helicase IV. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.761 |
| helD | lpoB | plu1779 | plu2824 | DNA helicase IV. | Penicillin-binding protein activator LpoB; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). | 0.768 |
| helD | ompN | plu1779 | plu1751 | DNA helicase IV. | Outer membrane protein N precursor (Porin OmpN). | 0.734 |
| helD | plu0289 | plu1779 | plu0289 | DNA helicase IV. | Unnamed protein product; Similar to putative lipoprotein YidQ precursor of Escherichia coli. | 0.726 |
| helD | plu1752 | plu1779 | plu1752 | DNA helicase IV. | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | 0.742 |
| helD | plu2166 | plu1779 | plu2166 | DNA helicase IV. | Unnamed protein product; Similar to unknown protein YdgH precursor of Escherichia coli. | 0.696 |
| helD | plu4132 | plu1779 | plu4132 | DNA helicase IV. | Unnamed protein product; Similar to putative lipoprotein YjeI precursor of Escherichia coli. | 0.634 |
| helD | rof | plu1779 | plu0690 | DNA helicase IV. | Rof protein. | 0.754 |
| helD | smp | plu1779 | plu0550 | DNA helicase IV. | Protein Smp precursor. | 0.769 |
| holD | helD | plu4251 | plu1779 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | DNA helicase IV. | 0.761 |
| holD | lpoB | plu4251 | plu2824 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Penicillin-binding protein activator LpoB; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). | 0.766 |
| holD | ompN | plu4251 | plu1751 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Outer membrane protein N precursor (Porin OmpN). | 0.773 |
| holD | plu0289 | plu4251 | plu0289 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unnamed protein product; Similar to putative lipoprotein YidQ precursor of Escherichia coli. | 0.432 |
| holD | plu1752 | plu4251 | plu1752 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | 0.773 |
| holD | plu2166 | plu4251 | plu2166 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unnamed protein product; Similar to unknown protein YdgH precursor of Escherichia coli. | 0.566 |
| holD | plu4132 | plu4251 | plu4132 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unnamed protein product; Similar to putative lipoprotein YjeI precursor of Escherichia coli. | 0.534 |
| holD | rof | plu4251 | plu0690 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Rof protein. | 0.740 |
| holD | smp | plu4251 | plu0550 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Protein Smp precursor. | 0.770 |
| lpoB | helD | plu2824 | plu1779 | Penicillin-binding protein activator LpoB; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). | DNA helicase IV. | 0.768 |
| lpoB | holD | plu2824 | plu4251 | Penicillin-binding protein activator LpoB; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.766 |
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