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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2865Unnamed protein product; Similar to unknown protein yejG of Escherichia coli. (114 aa)    
Predicted Functional Partners:
wzzE
Lipopolysaccharide biosynthesis protein WzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.774
flgM
Negative regulator of flagellin synthesis (Anti-sigma-28 factor) FlgM.
  
     0.773
plu0305
GAPES3 domain-containing protein; Unnamed protein product; Similar to putative membrane protein YhjK of Escherichia coli.
  
     0.772
plu2029
Unnamed protein product; Similar to unknown protein YecF of Escherichia coli.
  
     0.768
plu4140
Unnamed protein product; Similar to putative TetR-family regulatory protein YjdC of Escherichia coli.
  
     0.765
plu4771
Unnamed protein product; Similar to unknown protein YiiQ precursor of Escherichia coli.
  
     0.765
plu2479
Unnamed protein product; Similar to putative membrane protein YciC of Escherichia coli.
  
     0.764
plu3312
Unnamed protein product; Similar to putative alpha helix protein YfhG of Escherichia coli.
  
     0.753
plu2481
OMP_b-brl domain-containing protein; Unnamed protein product; Similar to Ail protein precursor of Yersinia (OmpX).
  
     0.750
plu2065
Unnamed protein product; Similar to probable membrane protein YchH of Escherichia coli.
  
     0.749
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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