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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu2961Unnamed protein product; Similar to bacteriophage tail fiber protein. (471 aa)    
Predicted Functional Partners:
uspA
Universal stress protein A; Required for resistance to DNA-damaging agents.
  
     0.668
plu1752
Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family.
  
     0.605
plu2962
Unnamed protein product; Similar to bacteriophage tail fiber protein.
      
0.576
dsbA
Disulfide interchange protein DsbA precursor.
  
     0.558
ompN
Outer membrane protein N precursor (Porin OmpN).
  
     0.548
plu3033
Unnamed protein product; Some similarities with unknown bacteriophage protein.
  
     0.541
plu1882
Sugarporin_N domain-containing protein; Unnamed protein product; Similar to putative glycoporin. Putative secreted protein.
  
     0.540
holD
DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.526
zapB
Cell division protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
     0.506
plu0418
Fimbrial domain-containing protein; Unnamed protein product; Similar to major structural subunit MrpA of Proteus mirabilis.
  
     0.502
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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