Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cpxA | holD | plu4795 | plu4251 | Two-component sensor kinase. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.678 |
| cpxA | plu1752 | plu4795 | plu1752 | Two-component sensor kinase. | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | 0.620 |
| cpxA | plu3009 | plu4795 | plu3009 | Two-component sensor kinase. | Unnamed protein product; Similar to phage tail fiber assembly protein. | 0.504 |
| cpxA | rof | plu4795 | plu0690 | Two-component sensor kinase. | Rof protein. | 0.438 |
| cpxA | uspA | plu4795 | plu0121 | Two-component sensor kinase. | Universal stress protein A; Required for resistance to DNA-damaging agents. | 0.557 |
| cpxA | zapB | plu4795 | plu4766 | Two-component sensor kinase. | Cell division protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. | 0.564 |
| holD | cpxA | plu4251 | plu4795 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Two-component sensor kinase. | 0.678 |
| holD | plu1752 | plu4251 | plu1752 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | 0.773 |
| holD | plu3009 | plu4251 | plu3009 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Unnamed protein product; Similar to phage tail fiber assembly protein. | 0.560 |
| holD | rof | plu4251 | plu0690 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Rof protein. | 0.740 |
| holD | uspA | plu4251 | plu0121 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Universal stress protein A; Required for resistance to DNA-damaging agents. | 0.771 |
| holD | zapB | plu4251 | plu4766 | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Cell division protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. | 0.754 |
| plu1752 | cpxA | plu1752 | plu4795 | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | Two-component sensor kinase. | 0.620 |
| plu1752 | holD | plu1752 | plu4251 | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.773 |
| plu1752 | plu3009 | plu1752 | plu3009 | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | Unnamed protein product; Similar to phage tail fiber assembly protein. | 0.521 |
| plu1752 | rof | plu1752 | plu0690 | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | Rof protein. | 0.736 |
| plu1752 | uspA | plu1752 | plu0121 | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | Universal stress protein A; Required for resistance to DNA-damaging agents. | 0.753 |
| plu1752 | zapB | plu1752 | plu4766 | Unnamed protein product; Highly similar to outer membrane protein N precursor (Porin OmpN); Belongs to the Gram-negative porin family. | Cell division protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. | 0.769 |
| plu3008 | plu3009 | plu3008 | plu3009 | Unnamed protein product; Some similarities with phage tail fiber assembly protein. | Unnamed protein product; Similar to phage tail fiber assembly protein. | 0.780 |
| plu3009 | cpxA | plu3009 | plu4795 | Unnamed protein product; Similar to phage tail fiber assembly protein. | Two-component sensor kinase. | 0.504 |
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