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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3033Unnamed protein product; Some similarities with unknown bacteriophage protein. (589 aa)    
Predicted Functional Partners:
plu3027
Baseplate_J domain-containing protein; Unnamed protein product; Similar to unknown bacteriophage protein.
 
     0.871
plu3030
Unnamed protein product; Similar to unknown bacteriophage protein.
 
     0.870
plu3029
Gp138_N domain-containing protein; Unnamed protein product; Similar to unknown bacteriophage protein.
 
     0.855
plu3031
Unnamed protein product; Similar to unknown bacteriophage protein.
       0.791
plu3032
Unnamed protein product; Some similarities with unknown protein of Photorhabdus.
       0.791
plu3036
Unnamed protein product; Similar to unknown bacteriophage protein.
 
     0.759
plu3025
Collar domain-containing protein; Unnamed protein product; Similar to Sc/SvQ protein of Escherichia coli plasmid p15B.
 
     0.718
plu3024
Unnamed protein product; Similar to putative tail fiber protein from a lambdoid prophage.
 
     0.688
plu4056
Uncharacterized protein; Truncated gene. Some similarities with the N-terminal region of bacteriophage protein.
  
     0.610
plu3498
Unnamed protein product; Some similarities with tail fiber protein.
  
     0.609
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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