close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3324Peptidase C80 domain-containing protein; Unnamed protein product; Similar to RTX toxin RtxA. (3531 aa)    
Predicted Functional Partners:
rtxC
Cytolysin-activating lysine-acyltransferase RtxC.
 
   
 0.806
plu3513
Unnamed protein product; Some similarities with heme receptor HasR.
  
 
 
 0.739
plu0634
Unnamed protein product; Similar to toxin secretion ATP-binding protein.
 
  
 0.730
plu3514
TPR_REGION domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
     0.688
plu3127
Unnamed protein product; Similar to toxin secretion transporter.
 
  
 0.659
plu3125
Unnamed protein product; Similar to toxin secretion transporter.
 
  
 0.635
plu1331
Unnamed protein product; Similar to unknown protein VC1446 of Vibrio cholerae, probable RTX toxin ABC transporter (IM-ABC) protein.
 
  
 0.613
plu1629
Lactamase_B domain-containing protein; Unnamed protein product; Similar to probable membrane protein YcaI of Escherichia coli.
  
  
 0.607
plu3126
Unnamed protein product; Similar to toxin secretion transporter (Membrane Fusion Protein (MFP)).
 
  
 0.601
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
  
 0.595
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.