STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3327Unnamed protein product; Similar to YcfA protein, phage protein-related. (199 aa)    
Predicted Functional Partners:
plu3326
Collar domain-containing protein; Unnamed protein product; Weakly similar to Sc/SvN protein, DNA inversion product.
 
    0.956
plu2024
Collar domain-containing protein; Unnamed protein product; Similar to tail fiber protein from lambdoid prophage.
 
    0.816
plu2303
Collar domain-containing protein; Unnamed protein product; Similar to tail fiber protein.
 
    0.815
plu1460
Collar domain-containing protein; Unnamed protein product; Some similarities with DNA inversion product, tail fiber protein homolog from lambdoid prophage.
 
    0.814
plu3025
Collar domain-containing protein; Unnamed protein product; Similar to Sc/SvQ protein of Escherichia coli plasmid p15B.
 
    0.813
plu0034
Collar domain-containing protein; Unnamed protein product; Some similarities with putative alternative tail fiber protein of bacteriophage-related plasmid and bacteriophage.
 
    0.786
plu3013
Collar domain-containing protein; Unnamed protein product; Similar to tail fiber assembly protein from bacteriophage.
  
    0.781
plu0020
Collar domain-containing protein; Unnamed protein product; Similar to putative alternative tail fiber protein of bacteriophage-related plasmid and bacteriophage.
 
    0.780
plu1464
Collar domain-containing protein; Unnamed protein product; Weakly similar to DNA inversion product, tail fiber protein homolog from lambdoid prophage.
  
    0.779
plu1463
Collar domain-containing protein; Unnamed protein product; Weakly similar to DNA inversion product, tail fiber protein homolog from lambdoid prophage.
  
    0.778
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.