STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3370Unnamed protein product; Similar to phospholipase A. (338 aa)    
Predicted Functional Partners:
plu3369
ANK_REP_REGION domain-containing protein; Unnamed protein product; Some similarities with phospholipase A accessory protein.
 
   
 0.939
nuoC
NADH dehydrogenase I chain C/D (NADH-ubiquinone oxidoreductase chain 3/4) (NUO3/NUO4); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 
 0.874
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
   
 0.864
plu3275
SseB_C domain-containing protein; Unnamed protein product; Some similarities with rhodanese-like protein SseB of Escherichia coli.
 
 0.795
plu1677
Collar domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown protein.
  
     0.728
plu1655
Collar domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown protein.
  
     0.716
plu1715
Unnamed protein product; Highly similar to unknown protein of Photorhabdus.
  
     0.712
plu2797
Unnamed protein product; Hypothetical protein.
  
 0.712
plu2947
Integrase_SAM-like_N domain-containing protein; Unnamed protein product; Similar to bacteriophage integrase; Belongs to the 'phage' integrase family.
  
     0.711
plu1718
Collar domain-containing protein; Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown protein.
  
     0.710
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.