Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cobB | mazG | plu2811 | plu0911 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | MazG protein. | 0.900 |
cobB | nadD | plu2811 | plu1300 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.921 |
cobB | nadE | plu2811 | plu3310 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | NH(3)-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.946 |
cobB | nadR | plu2811 | plu0553 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | Transcriptional regulator NadR. | 0.990 |
cobB | nudC | plu2811 | plu0488 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | NADH pyrophosphatase. | 0.904 |
cobB | pntA | plu2811 | plu2167 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.910 |
cobB | pntB | plu2811 | plu2168 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.900 |
cobB | ppnK | plu2811 | plu3373 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase); Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.918 |
cobB | sthA | plu2811 | plu4739 | CobB protein; Belongs to the sirtuin family. Class III subfamily. | Soluble pyridine nucleotide transhydrogenase (STH) (NAD(P)(+) transhydrogenase [B-specific]); Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.908 |
mazG | cobB | plu0911 | plu2811 | MazG protein. | CobB protein; Belongs to the sirtuin family. Class III subfamily. | 0.900 |
mazG | nadD | plu0911 | plu1300 | MazG protein. | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.902 |
mazG | nadE | plu0911 | plu3310 | MazG protein. | NH(3)-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.900 |
mazG | nadR | plu0911 | plu0553 | MazG protein. | Transcriptional regulator NadR. | 0.903 |
mazG | nudC | plu0911 | plu0488 | MazG protein. | NADH pyrophosphatase. | 0.906 |
mazG | pntA | plu0911 | plu2167 | MazG protein. | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.900 |
mazG | pntB | plu0911 | plu2168 | MazG protein. | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.901 |
mazG | ppnK | plu0911 | plu3373 | MazG protein. | Probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase); Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.901 |
mazG | sthA | plu0911 | plu4739 | MazG protein. | Soluble pyridine nucleotide transhydrogenase (STH) (NAD(P)(+) transhydrogenase [B-specific]); Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.906 |
nadD | cobB | plu1300 | plu2811 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | CobB protein; Belongs to the sirtuin family. Class III subfamily. | 0.921 |
nadD | mazG | plu1300 | plu0911 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | MazG protein. | 0.902 |
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