STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu3382Unnamed protein product; Some similarities with the N-terminal region of tail fiber protein. (447 aa)    
Predicted Functional Partners:
plu3381
Unnamed protein product; Similar to phage tail assembly protein.
  
    0.831
plu3383
Unnamed protein product; Similar to unknown protein of Photorhabdus.
  
    0.786
plu3384
Baseplate_J domain-containing protein; Unnamed protein product; Weakly similar to unknown bacteriophage protein.
       0.774
plu3385
Unnamed protein product; Hypothetical protein.
       0.584
plu0026
Unnamed protein product; Highly similar to tail protein.
  
    0.507
plu3386
Unnamed protein product; Some similarities with unknown protein of Photorhabdus.
       0.483
plu3430
Uncharacterized protein.
  
    0.472
plu0023
Baseplate_J domain-containing protein; Unnamed protein product; Similar to protein J (gpJ) of Enterobacteria phage P2.
  
  
 0.462
plu3424
Baseplate_J domain-containing protein; Unnamed protein product; Highly similar to phage-related baseplate assembly protein.
  
  
 0.462
plu0009
Unnamed protein product; Similar to protein D (gpD) of Enterobacteria phage P2.
  
    0.452
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.