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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3383Unnamed protein product; Similar to unknown protein of Photorhabdus. (201 aa)    
Predicted Functional Partners:
plu3384
Baseplate_J domain-containing protein; Unnamed protein product; Weakly similar to unknown bacteriophage protein.
 
     0.950
plu3381
Unnamed protein product; Similar to phage tail assembly protein.
  
    0.789
plu3382
Unnamed protein product; Some similarities with the N-terminal region of tail fiber protein.
  
    0.786
plu3395
Unnamed protein product; Similar to unknown protein.
  
     0.773
plu3405
Unnamed protein product; Some similarities with unknown protein.
  
     0.770
plu3404
Phage_Mu_F domain-containing protein; Unnamed protein product; Weakly similar to unknown protein.
  
    0.766
plu3403
Unnamed protein product; Weakly similar to unknown protein.
  
     0.740
plu2894
Unnamed protein product; Similar to unknown protein.
  
     0.681
plu0922
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
  
     0.645
plu3414
Lysozyme; Unnamed protein product; Similar to endolysin (lysozyme, muramidase, protein GP54). Putative secreted protein.
  
     0.619
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.