STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu3445Unnamed protein product; Similar to putative membrane protein. (110 aa)    
Predicted Functional Partners:
plu3444
Unnamed protein product; Highly similar to unknown protein.
 
     0.961
plu3448
Unnamed protein product; Similar to unknown protein.
 
    0.956
plu3441
Unnamed protein product; Similar to protein gp29 of Enterobacteria phage Mu.
 
     0.955
plu3442
Unnamed protein product; Similar to protein gp28 of Enterobacteria phage Mu.
 
     0.955
plu3439
Unnamed protein product; Similar to G protein (gp31) of Enterobacteria phage Mu.
 
     0.954
plu3447
SLT domain-containing protein; Unnamed protein product; Similar to putative soluble lytic murein transglycosylase.
 
    0.953
plu3440
Phage_Mu_F domain-containing protein; Unnamed protein product; Similar to the N-terminal region of gp30 protein of Enterobacteria phage Mu.
 
     0.952
plu3443
Unnamed protein product; Similar to gp27 protein of Enterobacteria phage Mu.
 
     0.952
plu3438
Unnamed protein product; Similar to unknown protein.
 
     0.868
plu3437
Unnamed protein product; Similar to unknown protein.
 
     0.864
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.