STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3473Unnamed protein product; Weakly similar to probable replication protein of bacteriophage. (250 aa)    
Predicted Functional Partners:
plu3472
AAA domain-containing protein; Unnamed protein product; Some similarities with DNA replication protein DnaC of bacteriophage.
  
  
 0.865
plu3471
Unnamed protein product; Similar to replicative DNA helicase of Bacteriophage.
  
  
 0.800
plu3475
YdaT_toxin domain-containing protein; Unnamed protein product; Some similarities with unknown protein and with YdaT protein of Escherichia coli.
       0.775
plu3474
Unnamed protein product; Hypothetical gene.
       0.773
plu3476
Unnamed protein product; Some similarities with unknown protein and with YdaS of Escherichia coli.
       0.679
plu0367
Unnamed protein product; Similar to unknown protein.
  
     0.536
plu3477
Unnamed protein product; Similar to putative repressor protein encoded by cryptic prophage.
       0.461
plu0370
GPW_gp25 domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.454
plu0508
Unnamed protein product; Similar to unknown protein. Putative secreted protein.
  
     0.448
wecD
Lipopolysaccharide biosynthesis protein wecD; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.
  
     0.439
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.