STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3483Unnamed protein product; Similar to bacteriophage protein. (165 aa)    
Predicted Functional Partners:
plu3428
Unnamed protein product; Similar to unknown protein.
  
     0.714
plu3395
Unnamed protein product; Similar to unknown protein.
  
     0.711
plu3405
Unnamed protein product; Some similarities with unknown protein.
  
     0.711
plu3437
Unnamed protein product; Similar to unknown protein.
  
     0.709
plu2935
Unnamed protein product; Some similarities with bacteriophage recombination protein.
 
     0.702
plu3461
Mor domain-containing protein; Unnamed protein product; Similar to DNA-binding protein RdgB which regulates pectin lyase in response to DNA damage.
  
     0.667
plu3384
Baseplate_J domain-containing protein; Unnamed protein product; Weakly similar to unknown bacteriophage protein.
  
     0.664
plu3429
PhageMin_Tail domain-containing protein; Unnamed protein product; Similar to tail protein.
  
     0.664
plu3029
Gp138_N domain-containing protein; Unnamed protein product; Similar to unknown bacteriophage protein.
  
     0.663
plu3448
Unnamed protein product; Similar to unknown protein.
  
     0.663
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.