STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3506Unnamed protein product; Similar to ccm gene codes for both Ccm1 and Ccm2 proteins of Proteus mirabilis. (219 aa)    
Predicted Functional Partners:
plu0510
Unnamed protein product; Similar to unknown protein.
  
     0.644
plu4280
Unnamed protein product; Similar to Rhs-family protein.
  
     0.628
plu2715
Unnamed protein product; Similar to outer membrane siderophore receptor CjrC of Escherichia coli O164.
  
     0.604
plu2230
Metallophos domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
  
     0.596
plu3926
Unnamed protein product; Some similarities with ribonuclease; Belongs to the RNase T2 family.
  
     0.589
plu3577
DUF637 domain-containing protein; Unnamed protein product; Some similarities with hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
 
   0.588
plu0228
PMT_2 domain-containing protein; Truncated gene. Some similarities with binding protein component of ABC transporter.
  
    0.571
plu3814
MFS domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.558
pbgE2
PbgE2 protein; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnE family.
  
     0.555
plu0335
ImpA_N domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
  
     0.537
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.