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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3519Unnamed protein product; Highly similar to outer membrane receptor protein. (676 aa)    
Predicted Functional Partners:
plu2158
Unnamed protein product; Similar to hypothetical fimbrial chaperone YraI precursor of Escherichia coli.
  
     0.606
plu2156
Unnamed protein product; Similar to fimbrial adhesin precursor.
  
     0.590
plu2157
Unnamed protein product; Similar to hypothetical outer membrane usher protein YraJ precursor of Escherichia coli.
  
     0.589
plu0267
Unnamed protein product; Similar to putative fimbrial chaperone.
  
     0.569
phfD
PhfD protein; Similar to outer membrane usher protein precursor.
  
     0.563
tonB
TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.562
plu3520
Unnamed protein product; Weakly similar to hypothetical protein.
  
    0.554
plu0783
Unnamed protein product; Similar to putative fimbrial chaperone.
  
     0.549
phfC
PhfC protein; Similar to putative fimbrial chaperone.
  
     0.545
plu0790
Unnamed protein product; Weakly similar to putative fimbrial chaperone.
  
     0.538
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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