Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu3529Asp_Arg_Hydrox domain-containing protein; Unnamed protein product; Similar to aspartyl (asparaginyl) beta hydroxylase. (262 aa)    
Predicted Functional Partners:
plu0158
Unnamed protein product; Similar to L-arginine:lysine amidinotransferase and similar to L-arginine:glycine amidinotransferase.
 
     0.703
plu3558
Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown glycine-rich protein.
  
     0.686
plu0856
JmjC domain-containing protein; Truncated gene. Similar to N-terminal region of colicin V secretion protein.
  
     0.652
plu3560
Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown glycine-rich protein.
  
     0.620
plu0447
Unnamed protein product; Some similarities with unknown protein.
  
     0.564
plu3530
Unnamed protein product; Similar to ATP-binding component (IM-ABC) of ABC transport system.
       0.523
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
     0.522
plu3526
JmjC domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
     0.514
plu4590
Unnamed protein product; Similar to unknown protein.
  
     0.486
plu3019
Unnamed protein product; Some similarities with glycosyltransferase.
  
     0.480
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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