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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3537JmjC domain-containing protein; Unnamed protein product; Weakly similar to unknown protein. (285 aa)    
Predicted Functional Partners:
plu3536
N-acetyltransferase domain-containing protein; Unnamed protein product; Some similarities with spermidine acetyltransferase.
       0.773
plu3538
Diaminobutyrate--2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.773
plu3532
Unnamed protein product; Similar to proteins involved in antibiotics biosynthesis (NosC, tyrocidine synthetase III, gramicidin S synthetase II...).
 
    0.681
plu3535
Unnamed protein product; Highly similar to synthetases involved in antibiotic biosynthesis (tyrocidine, gramicidine...).
 
     0.680
plu3534
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis (syringomycine, tyrocidine...).
 
     0.677
plu3533
Carrier domain-containing protein; Unnamed protein product; Similar to proteins involved in antibiotics biosynthesis (NosC, gramidin S synthetase II, tyrocidine synthetase III...); Belongs to the ATP-dependent AMP-binding enzyme family.
 
     0.658
plu3526
JmjC domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
     0.648
plu3530
Unnamed protein product; Similar to ATP-binding component (IM-ABC) of ABC transport system.
 
     0.616
plu3531
Unnamed protein product; Some similarities with proteins involved in antibiotics biosynthesis (bacitracin synthetase 3...) and in fatty acid synthases.
       0.559
plu4144
JmjC domain-containing protein; Unnamed protein product; Some similarities with unknown eucaryotic protein.
  
     0.545
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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