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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3558Unnamed protein product; Highly similar to unknown protein of Photorhabdus and some similarities with unknown glycine-rich protein. (434 aa)    
Predicted Functional Partners:
plu0158
Unnamed protein product; Similar to L-arginine:lysine amidinotransferase and similar to L-arginine:glycine amidinotransferase.
  
     0.731
plu0447
Unnamed protein product; Some similarities with unknown protein.
  
     0.691
plu3529
Asp_Arg_Hydrox domain-containing protein; Unnamed protein product; Similar to aspartyl (asparaginyl) beta hydroxylase.
  
     0.686
plu2323
PKS_TE domain-containing protein; Unnamed protein product; Similar to Irp4 protein of Yersinia enterocolitica.
  
     0.520
plu1217
PKS_TE domain-containing protein; Unnamed protein product; Some similarities with thioesterase II, pyochelin biosynthetic protein PchC and gramicidin S biosynthesis protein GrsT.
  
     0.446
plu4590
Unnamed protein product; Similar to unknown protein.
  
     0.440
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
     0.409
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.