Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
plu3561MFS domain-containing protein; Unnamed protein product; Similar to proton antiporter efflux pump. Putative transmembrane protein. (510 aa)    
Predicted Functional Partners:
plu3562
Unnamed protein product; Similar to dehydrogenase PapC of Streptomyces pristinaespiralis.
       0.773
plu3563
Glutamine amidotransferase type-1 domain-containing protein; Unnamed protein product; Similar to p-aminobenzoic acid synthase.
       0.773
plu3564
Unnamed protein product; Weakly similar to PapB protein and to chorismate mutase/prephenate dehydrogenase.
       0.773
plu3565
Aminotran_1_2 domain-containing protein; Unnamed protein product; Similar to class II aminotransferase and 5-aminolevulinic acid synthase.
       0.636
plu1505
MFS domain-containing protein; Unnamed protein product; Some similarities with bicyclomycin resistance protein and multidrug resistance protein D.
  
     0.630
plu3566
MTS domain-containing protein; Unnamed protein product; Similar to putative methylase and with protoporphyrinogen oxidase.
       0.628
plu3567
DAO domain-containing protein; Unnamed protein product; Similar to N-formimidoyl fortimicin A synthase.
       0.628
plu4255
MFS domain-containing protein; Unnamed protein product; Similar to bicyclomycin resistance protein Bcr (sulfonamide resistance protein).
  
     0.535
emrA
Multidrug resistant protein A.
 
 
 0.527
plu4679
Biotin_lipoyl_2 domain-containing protein; Unnamed protein product; Similar to multidrug resistance protein A.
 
 
 0.524
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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