STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3647Unnamed protein product; Similar to unknown protein. (175 aa)    
Predicted Functional Partners:
priC
Primosomal replication factor N''.
  
     0.769
plu0802
HTH tetR-type domain-containing protein; Unnamed protein product; Similar to putative TetR-family regulatory protein.
  
     0.726
plu4544
HTH Mu-type domain-containing protein; Unnamed protein product; Some similarities with the N-terminal region of the repressor protein CI and with Mu transposase.
  
     0.691
plu1374
TPR_REGION domain-containing protein; Unnamed protein product; Weakly similar to putative fimbrial biogenesis and twitching motility protein. Putative transmembrane secreted protein.
  
    0.621
plu0922
HTH luxR-type domain-containing protein; Unnamed protein product; Weakly similar to transcriptional regulator, LuxR family.
  
     0.606
plu3720
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator LuxR family.
  
     0.600
plu3221
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to probable transcription regulator, LuxR family.
  
     0.590
secM
Secretion monitor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
       0.577
plu2003
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to transcriptional regulator, LuxR family.
  
     0.560
phlA
Hemolysin PhlA.
  
     0.559
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.