STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abgTAminobenzoyl-glutamate transport protein; Truncated gene. Some similarities with probable transcriptional regulator, LuxR family. (508 aa)    
Predicted Functional Partners:
abgA
Aminobenzoyl-glutamate utilization protein A.
 
  
 0.924
abgB
Aminobenzoyl-glutamate utilization protein B.
 
  
 0.855
abgR
Putative transcriptional regulator AbgR; Belongs to the LysR transcriptional regulatory family.
 
    0.528
plu2680
Unnamed protein product; Highly similar to proton/sodium-glutamate symport protein (Glutamate-aspartate carrier protein) YdjN of Escherichia coli; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.484
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
  
    0.459
hcaD
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component; Part of the multicomponent 3-phenylpropionate dioxygenase, that converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid- dihydrodiol (CI-dihydrodiol), respectively.
   
    0.457
plu2637
Unnamed protein product; Hypothetical transmembrane protein.
 
     0.416
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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