STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3738Fe/B12 periplasmic-binding domain-containing protein; Unnamed protein product; Some similarities with putative iron(III) ABC transporter, periplasmic iron-binding protein. (378 aa)    
Predicted Functional Partners:
plu2851
ABC transporter domain-containing protein; Unnamed protein product; Similar to Hemin/Siderophore transport ATP-binding protein.
 
 
 0.889
plu2852
Unnamed protein product; Similar to Hemin/Siderophore ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.848
fepG
Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.645
plu2850
Unnamed protein product; Similar to outer membrane protein precursor.
  
  
 0.593
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
 
 0.563
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 
 0.553
btuC
Vitamin B12 transport system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
 
 
 
 0.552
fecE
Iron(III) dicitrate transport ATP-binding protein FecE.
  
 
 0.551
fepC
Ferric enterobactin transport ATP-binding protein FepC.
  
 
 0.551
plu2316
Unnamed protein product; Similar to the pesticin receptor precursor FuyA (IRPC).
  
  
 0.547
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.