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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
plu3745Unnamed protein product; Similar to putative polysaccharide export protein YccZ precursor. (381 aa)    
Predicted Functional Partners:
wzc
Tyrosine-protein kinase Wzc.
 
 
 0.998
wzb
Low molecular weight protein-tyrosine-phosphatase Wzb.
  
 0.969
wblF
WblF protein; Similar to putative glycosyl transferase.
 
  
 0.783
wecA
Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55).
    
 0.697
wblM
WblM protein; Similar to TrsG which plays a putative role in galactose modification.
  
  
 0.598
ompA
Outer membrane protein A precursor (Outer membrane protein II*); Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
 0.559
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
     
 0.558
wblI
WblI protein; Similar to probable glycosyltransferase.
  
  
 0.545
plu2724
UPF0370 protein plu2724; Unnamed protein product; Highly similar to putative membrane protein.
  
     0.536
wecG
UDP-N-acetyl-D-mannosaminuronic acid transferase (UDP-ManNAcA transferase); Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.
     
 0.515
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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