STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3748Unnamed protein product; Some similarities with phage structural protein P5. (133 aa)    
Predicted Functional Partners:
plu3747
Unnamed protein product; Similar to probable endopeptidase gp15 protein of lamdoid prophage.
 
     0.803
plu3749
Unnamed protein product; Similar to phage lysis protein S (holin).
       0.777
plu3027
Baseplate_J domain-containing protein; Unnamed protein product; Similar to unknown bacteriophage protein.
 
     0.578
plu3029
Gp138_N domain-containing protein; Unnamed protein product; Similar to unknown bacteriophage protein.
  
     0.560
plu3030
Unnamed protein product; Similar to unknown bacteriophage protein.
 
     0.546
plu4325
HNHc domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.462
plu3036
Unnamed protein product; Similar to unknown bacteriophage protein.
 
     0.448
plu3498
Unnamed protein product; Some similarities with tail fiber protein.
  
     0.429
plu4056
Uncharacterized protein; Truncated gene. Some similarities with the N-terminal region of bacteriophage protein.
  
     0.429
fliD
Flagellar hook-associated protein 2 (HAP2) (Filament cap protein) (Flagellar cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.406
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.