Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu3750Glyco_trans_2-like domain-containing protein; Unnamed protein product; Similar to putative glycosyl transferase. (329 aa)    
Predicted Functional Partners:
plu2411
Glyco_trans_2-like domain-containing protein; Unnamed protein product; Some similarities with glycosyltransferase.
 
   
 0.688
wblT
WblT protein; Some similarities with exopolysaccharide biosynthesis protein.
 
   
 0.629
galE
UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase); Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.553
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 
 0.461
plu2735
Unnamed protein product; Similar to ABC transporter (ATP-binding protein subunit).
  
 
   0.416
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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