Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sctHType III secretion component protein SctH; Similar to Yop proteins translocation protein H. (188 aa)    
Predicted Functional Partners:
sctI
Type III secretion component protein SctI; Similar to Yop proteins translocation protein I.
       0.580
sctJ
Type III secretion component protein SctJ; Similar to Yop proteins translocation protein J.
       0.580
sctF
Type III secretion component protein SctF; Similar to Yop proteins translocation protein F.
    
  0.513
sctG
Type III secretion component protein SctG; Similar to Yop proteins translocation protein G.
       0.410
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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