Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
plu3819Unnamed protein product; Highly similar to hypothetical oxidoreductase YbbO of Escherichia coli; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (261 aa)    
Predicted Functional Partners:
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
 
 0.792
tesA
Acyl-CoA thioesterase I precursor (Protease I) (Lysophospholipase L1) (Lecithinase B).
  
    0.771
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
 
 0.729
plu3821
PHB domain-containing protein; Unnamed protein product; Similar to putative protease YbbK of Escherichia coli.
   
 
 0.720
plu3820
Unnamed protein product; Similar to putative thioredoxin-like protein YbbN of Escherichia coli.
       0.671
plu1878
Carrier domain-containing protein; Unnamed protein product; Similar to antibiotic synthetase.
  
  
 0.580
ybbA
Probable ABC transporter ATP-binding protein YbbA.
     
 0.565
ybbP
Probable ABC transporter permease protein YbbP.
     
 0.543
plu3923
Condensation domain-containing protein; Unnamed protein product; Weakly similar to synthetases (pyoverdine synthetase B, actinomycin synthetase II AcmB, mycosubtilin synthetase chain MycB...).
  
  
 0.514
aas
2-acylglycerophosphoethanolamine acyl transferase/acyl carrier protein synthase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1.
 
 
 
 0.472
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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