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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoDCytochrome O ubiquinol oxidase protein cyoD (ubiquinol oxidase chain D). (110 aa)    
Predicted Functional Partners:
cyoA
Ubiquinol oxidase polypeptide II precursor (cytochrome O subunit 2) (oxidase BO(3) subunit 2) (cytochrome O ubiquinol oxidase subunit 2) (ubiquinol oxidase chain B).
 
 0.999
cyoB
Ubiquinol oxidase polypeptide I (cytochrome O subunit 1) (oxidase BO(3) subunit 1) (cytochrome O ubiquinol oxidase subunit 1) (ubiquinol oxidase chain A); Belongs to the heme-copper respiratory oxidase family.
 
 0.999
cyoC
Cytochrome O ubiquinol oxidase subunit III (ubiquinol oxidase chain C).
 
 0.999
cyoE
Protoheme IX farnesyltransferase (heme O synthase); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.998
sdhB
Succinate dehydrogenase iron sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.718
sdhD
Succinate dehydrogenase hydrophobic membrane anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
 
 0.674
sdhC
Succinate dehydrogenase cytochrome b-556 subunit.
   
 
  0.629
frdB
Fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
 0.585
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.573
frdA
Fumarate reductase flavoprotein subunit.
   
 
  0.573
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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