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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRPhosphate regulon sensor protein. (446 aa)    
Predicted Functional Partners:
phoB
Phosphate regulon transcriptional regulatory protein.
 0.998
ompR
Two-component response regulator.
 
 0.720
phoP
Two-component response regulator PhoP.
 
 0.715
tctD
Two-component response regulator.
 
 0.697
arcA
Two-component system, OmpR family, aerobic respiration control protein ArcA; Negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA) (dye resistance protein).
 
 0.691
cpxR
Two-component response regulator.
 
 0.689
baeR
Two-component response regulator.
 
 0.688
arcB
Aerobic respiration control sensor protein.
 
 
0.666
bvgS
Virulence sensor protein BvgS precursor.
 
 
 
0.641
barA
Sensor protein BarA.
 
 
 
0.639
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.