Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu3930Fido domain-containing protein; Unnamed protein product; Some similarities with Huntington interacting protein. (386 aa)    
Predicted Functional Partners:
plu3214
Fido domain-containing protein; Unnamed protein product; Similar to unknown protein.
 
     0.705
plu2421
Fido domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.695
plu4904
Unnamed protein product; Similar to ATP-dependent DNA helicase.
 
     0.524
rdgC
Recombinaison associated protein; May be involved in recombination; Belongs to the RdgC family.
       0.513
plu3931
Unnamed protein product; Similar to unknown protein of Photorhabdus.
       0.440
plu0382
Unnamed protein product; Some similarities with unknown protein.
 
     0.438
plu0253
Fido domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.407
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.