Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu3966Unnamed protein product; Similar to putative lipoprotein. (119 aa)    
Predicted Functional Partners:
plu3965
Unnamed protein product; Similar to putative lipoprotein.
 
    0.987
plu3967
Unnamed protein product; Highly similar to putative lipoprotein.
 
    0.983
plu0539
PT-VENN domain-containing protein; Unnamed protein product; Some similarities with C-terminal region of hemagglutinin/hemolysin-related protein.
  
     0.641
plu0537
PT-VENN domain-containing protein; Unnamed protein product; Some similarities with C-terminal region of hemagglutinin/hemolysin-related protein.
  
     0.560
plu0548
Haemagg_act domain-containing protein; Unnamed protein product; Similar to hemagglutinin/hemolysin-related protein.
  
     0.542
plu3569
POTRA domain-containing protein; Unnamed protein product; Similar to outer membrane hemolysin activator protein.
  
     0.542
plu0226
Unnamed protein product; Similar to hemolysin activation/secretion protein.
  
     0.531
plu3065
POTRA domain-containing protein; Unnamed protein product; Similar to hemolysin secretion/activation protein.
  
     0.531
plu3718
Haemagg_act domain-containing protein; Unnamed protein product; Similar to hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
     0.520
plu1367
Haemagg_act domain-containing protein; Unnamed protein product; Similar to hemagglutinin-like secreted protein. Putative secreted protein.
  
     0.517
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.