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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu3967Unnamed protein product; Highly similar to putative lipoprotein. (223 aa)    
Predicted Functional Partners:
plu3966
Unnamed protein product; Similar to putative lipoprotein.
 
    0.975
plu3965
Unnamed protein product; Similar to putative lipoprotein.
 
    0.965
plu0539
PT-VENN domain-containing protein; Unnamed protein product; Some similarities with C-terminal region of hemagglutinin/hemolysin-related protein.
  
     0.590
plu3569
POTRA domain-containing protein; Unnamed protein product; Similar to outer membrane hemolysin activator protein.
  
     0.531
plu0226
Unnamed protein product; Similar to hemolysin activation/secretion protein.
  
     0.521
plu3065
POTRA domain-containing protein; Unnamed protein product; Similar to hemolysin secretion/activation protein.
  
     0.520
plu0537
PT-VENN domain-containing protein; Unnamed protein product; Some similarities with C-terminal region of hemagglutinin/hemolysin-related protein.
  
     0.499
plu0548
Haemagg_act domain-containing protein; Unnamed protein product; Similar to hemagglutinin/hemolysin-related protein.
  
     0.478
plu1931
HTH cro/C1-type domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.470
plu3718
Haemagg_act domain-containing protein; Unnamed protein product; Similar to hemagglutinin/hemolysin-related proteins. Putative transmembrane protein.
  
     0.465
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.