STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4056Uncharacterized protein; Truncated gene. Some similarities with the N-terminal region of bacteriophage protein. (602 aa)    
Predicted Functional Partners:
plu4057
Unnamed protein product; Similar to bacteriophage protein.
  
    0.797
plu3494
Unnamed protein product; Similar to bacteriophage protein.
 
     0.730
plu4050
Uncharacterized protein; Truncated gene. Some similarities with the C-terminal region of Ner-like DNA-binding protein.
 
     0.723
plu3033
Unnamed protein product; Some similarities with unknown bacteriophage protein.
  
     0.610
plu4058
Unnamed protein product; Some similarities with bacteriophage protein.
       0.556
plu0019
Unnamed protein product; Similar to tail fiber assembly protein from bacteriophage.
 
    0.538
plu3327
Unnamed protein product; Similar to YcfA protein, phage protein-related.
 
    0.528
plu0367
Unnamed protein product; Similar to unknown protein.
  
     0.519
plu2817
TauD domain-containing protein; Unnamed protein product; Similar to pyoverdine biosynthesis protein PvcB of Pseudomonas aeruginosa.
  
     0.488
plu0366
Unnamed protein product; Similar to unknown protein.
  
     0.447
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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