STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4058Unnamed protein product; Some similarities with bacteriophage protein. (138 aa)    
Predicted Functional Partners:
plu4057
Unnamed protein product; Similar to bacteriophage protein.
  
    0.619
plu4056
Uncharacterized protein; Truncated gene. Some similarities with the N-terminal region of bacteriophage protein.
       0.556
plu4059
Unnamed protein product; Hypothetical protein.
       0.513
plu0009
Unnamed protein product; Similar to protein D (gpD) of Enterobacteria phage P2.
   
   0.402
plu3427
Unnamed protein product; Highly similar to hypothetical protein and some similarities with bacteriophage P2 protein D (gpD).
   
   0.402
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.