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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4062Barstar domain-containing protein; Unnamed protein product; Similar to ribonuclease inhibitor (barstar). (89 aa)    
Predicted Functional Partners:
plu4063
Ribonuclease; Unnamed protein product; Similar to ribonuclease precursor (Barnase) (RNase Ba).
 
 
 0.982
plu4771
Unnamed protein product; Similar to unknown protein YiiQ precursor of Escherichia coli.
  
     0.750
plu2029
Unnamed protein product; Similar to unknown protein YecF of Escherichia coli.
  
     0.749
plu4066
Unnamed protein product; Similar to unknown protein YhdP of Escherichia coli.
 
     0.745
plu0289
Unnamed protein product; Similar to putative lipoprotein YidQ precursor of Escherichia coli.
  
     0.744
plu0305
GAPES3 domain-containing protein; Unnamed protein product; Similar to putative membrane protein YhjK of Escherichia coli.
  
     0.741
plu3995
Unnamed protein product; Similar to unknown protein YqjE of Escherichia coli.
  
    0.734
plu2166
Unnamed protein product; Similar to unknown protein YdgH precursor of Escherichia coli.
  
     0.733
plu2865
Unnamed protein product; Similar to unknown protein yejG of Escherichia coli.
  
     0.731
plu2480
OMP_b-brl domain-containing protein; Unnamed protein product; Similar to Ail protein precursor of Yersinia (OmpX).
  
     0.727
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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