STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4063Ribonuclease; Unnamed protein product; Similar to ribonuclease precursor (Barnase) (RNase Ba). (154 aa)    
Predicted Functional Partners:
plu4062
Barstar domain-containing protein; Unnamed protein product; Similar to ribonuclease inhibitor (barstar).
 
 
 0.982
plu4066
Unnamed protein product; Similar to unknown protein YhdP of Escherichia coli.
       0.671
tldD
TldD protein, suppresses the inhibitory activity of the carbon storage regulator (CSRA).
       0.655
plu4065
Unnamed protein product; Similar to carbon-nitrogen hydrolase.
       0.655
cafA
Ribonuclease G (RNase G) (cytoplasmic axial filament protein).
       0.545
plu4068
dTTP/UTP pyrophosphatase; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.545
plu0094
Unnamed protein product; Similar to unknown protein YrfD of Escherichia coli.
  
     0.528
plu0289
Unnamed protein product; Similar to putative lipoprotein YidQ precursor of Escherichia coli.
  
     0.439
plu1472
Unnamed protein product; Similar to putative membrane protein.
  
     0.421
plu1967
OMP_b-brl domain-containing protein; Unnamed protein product; Similar to putative PagC-like membrane protein (virulence-related membrane protein) of Escherichia coli O157:H7.
  
     0.410
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.