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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4080Unnamed protein product; Unknown protein with two candidate membrane-spanning segments. (247 aa)    
Predicted Functional Partners:
plu4079
Unnamed protein product; Sone similarities in the N-terminal region with dehydrogenase.
    
 0.789
plu4081
Pyruvate carboxyltransferase domain-containing protein; Unnamed protein product; Similar in the N-terminal region with aldolase.
  
  
 0.776
plu4078
Unnamed protein product; Similar to putative transferase protein.
     
 0.775
plu4077
Unnamed protein product; Some similarities with unknown protein.
       0.773
ISPlu4B
Transposase, IS4 family.
       0.773
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 
 0.634
plu4083
Unnamed protein product; Hypothetical gene.
  
  
 0.524
plu4084
Bcr/CflA family efflux transporter; Unnamed protein product; Similar to putative transport protein and multidrug resistance protein like bicyclomycin resistance protein.
       0.468
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
 
 0.413
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.