Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
livHHigh-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (308 aa)    
Predicted Functional Partners:
livG
High-affinity branched-chain amino acid transport ATP-binding protein LivG.
 
 
 0.999
livM
High-affinity branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livF
High-affinity branched-chain amino acid transport ATP-binding protein LivF; Belongs to the ABC transporter superfamily.
 
 
 0.998
livK
Leucine-specific binding protein precursor LivK.
 
 
 0.998
plu4267
Peripla_BP_6 domain-containing protein; Unnamed protein product; Some similarities with ABC-type transport system branched-chain amino acid-binding protein precursor.
 
  
 0.773
plu4305
Unnamed protein product; Similar to unknown protein.
     
 0.532
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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