Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu4144JmjC domain-containing protein; Unnamed protein product; Some similarities with unknown eucaryotic protein. (238 aa)    
Predicted Functional Partners:
plu4143
Unnamed protein product; Some similarities with agmatinase SpeB (Agmatine ureohydrolase) (AUH); Belongs to the arginase family.
       0.773
plu4145
Unnamed protein product; Some similarities with ABC-type transport protein (IM-ABC type).
       0.773
plu4146
Unnamed protein product; Hypothetical protein.
       0.773
plu2455
Unnamed protein product; Some weak similarities with calpain cysteine protease.
  
     0.718
plu3537
JmjC domain-containing protein; Unnamed protein product; Weakly similar to unknown protein.
  
     0.545
cpmD
CpmD protein involved in carbapenem biosynthesis.
  
     0.485
plu1816
UPF0176 protein plu1816; Unnamed protein product; Similar to unknown protein YceA of Escherichia coli; Belongs to the UPF0176 family.
  
     0.485
plu4148
Uncharacterized protein; Truncated gene. Some similarities with unknown protein of Photorhabdus luminescens.
       0.480
plu4149
Unnamed protein product; Similar to butirosin-biosynthetic protein BtrA of Bacillus circulans. Putative transmembrane protein.
       0.455
plu3529
Asp_Arg_Hydrox domain-containing protein; Unnamed protein product; Similar to aspartyl (asparaginyl) beta hydroxylase.
  
     0.439
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.