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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tccB1Highly similar to insecticidal toxin complex protein TccB of W14 Putative transmembrane protein. (1564 aa)    
Predicted Functional Partners:
tcaC
Highly similar to insecticidal toxin complex protein TcaC of W14.
  
 
 0.907
tcdB1
Highly similar to insecticidal toxin complex protein TcdB.
  
 
 0.906
tccC3
Insecticidal toxin complex protein TccC3.
  
 
 0.905
tccC6
Insecticidal toxin complex protein TccC6.
  
 
 0.905
tccC7
Insecticidal toxin complex protein TccC7.
  
 
 0.905
tccC2
Insecticidal toxin complex protein TccC2.
  
 
 0.904
tccC5
Insecticidal toxin complex protein TccC5.
  
 
 0.904
tccC1
Insecticidal toxin complex protein TccC1; Truncated gene. Highly similar to the C-terminal region of insecticidal toxin complex protein TccZ, disruption of the gene tccZ in TT01 genome compared to W14.
 
 
 0.901
tccA1
Highly similar to insecticidal toxin complex protein TccA of W14.
   
 
 0.840
tcdB2
Insecticidal toxin complex protein TcdB2.
  
 
 0.813
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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