STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plu4181LuxE domain-containing protein; Unnamed protein product; Some similarities with fatty acyl-protein synthetase. (376 aa)    
Predicted Functional Partners:
plu4180
Unnamed protein product; Some similarities with fatty-acyl-CoA reductase.
 
     0.955
plu4179
Unnamed protein product; Similar to the phenylacetyl-CoA ligase (in the phenylacetic acid catabolic pathway).
 
     0.929
plu4178
N-acetyltransferase domain-containing protein; Unnamed protein product; Some similarities with hypothetical proteins.
 
     0.921
luxC
Fatty acid reductase; LuxC is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase.
 
 
 
 0.914
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
  
 0.574
plu2442
Unnamed protein product; Some similarities with the nematicidal protein 2 of Xenorhabdus bovienii. Putative transmembrane protein.
  
     0.463
plu2222
Unnamed protein product; Similar to the nematicidal protein 2. Probable membrane protein.
  
     0.454
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
     
 0.414
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.