Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tccC6Insecticidal toxin complex protein TccC6. (965 aa)    
Predicted Functional Partners:
tcdB1
Highly similar to insecticidal toxin complex protein TcdB.
 
 
   0.898
tcdB2
Insecticidal toxin complex protein TcdB2.
 
 
   0.891
tcaC
Highly similar to insecticidal toxin complex protein TcaC of W14.
 
 
   0.881
tcdA1
Highly similar to insecticidal toxin complex protein TcdA (toxin A).
 
   0.799
tcdA4
Insecticidal toxin complex protein TcdA4.
 
   0.799
tcdA2
Insecticidal toxin complex protein TcdA2.
 
   0.799
tcdA5
Insecticidal toxin complex protein TcdA5.
 
   0.799
tccB3
Insecticidal toxin complex protein TccB3.
 
   0.798
tccB2
Insecticidal toxin complex protein TccB2.
 
   0.798
tccB1
Highly similar to insecticidal toxin complex protein TccB of W14 Putative transmembrane protein.
 
   0.798
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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