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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4187Unnamed protein product; Some similarities with cyclase/dehydrase/aromatase. (480 aa)    
Predicted Functional Partners:
plu4194
Unnamed protein product; Similar to polyketide ketoreductase.
  
  
  0.938
plu4188
AMP-binding domain-containing protein; Unnamed protein product; Some similarities with long-chain acyl-CoA synthetase (ligase).
       0.777
plu4186
Unnamed protein product; Weakly similar to unknown protein; Belongs to the UPF0255 family.
       0.776
plu3528
TauD domain-containing protein; Unnamed protein product; Some similarities with putative oxygenase and clavaminate synthase 1.
  
     0.767
plu3001
Uncharacterized protein; Truncated gene. Some similarities with unknown protein YnfI precursor of Escherichia coli.
  
   
 0.763
plu4189
Carrier domain-containing protein; Unnamed protein product; Hypothetical gene.
       0.708
plu0297
Cyclo(L-leucyl-L-leucyl) synthase; It uses activated amino acids in the form of aminoacyl-tRNAs (aa-tRNAs) as substrates to catalyze the ATP-independent formation of cyclodipeptides which are intermediates in diketopiperazine (DKP) biosynthetic pathways. Catalyzes the formation of cyclo(L-Leu-L-Leu) (cLL) from L-leucyl-tRNA(Leu). Can incorporate various nonpolar residues, such as L-phenylalanine, L-leucine and L-methionine, into cyclodipeptides; Belongs to the CDPS family.
  
     0.680
plu4190
Ketoacyl_synth_N domain-containing protein; Unnamed protein product; Some similarities with the N-terminal region of 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.663
plu4191
PKS_KS domain-containing protein; Unnamed protein product; Similar to polyketide beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.663
plu0159
FA_desaturase domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
     0.630
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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