STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4210Uncharacterized protein; Truncated gene. Similar to the N terminal part of unknown proteins of Photorhabdus luminescens. (868 aa)    
Predicted Functional Partners:
plu3252
Unnamed protein product; Similar to unknown protein.
  
   
 0.759
plu3236
Unnamed protein product; Similar to unknown protein.
  
   
 0.756
pilV
PilV protein; Similar to type IV prepilin PilV protein.
  
     0.731
plu0233
N6_Mtase domain-containing protein; Unnamed protein product; Similar to unknown protein and some weak similarities with deoxyribonuclease/methylase.
  
     0.728
plu4216
Unnamed protein product; Similar to unknown protein.
  
     0.701
plu3240
Unnamed protein product; Similar to unknown protein.
  
     0.694
plu4211
Unnamed protein product; Highly similar to Hcp protein.
 
     0.682
plu1894
HNHc domain-containing protein; Unnamed protein product; Similar to pyocin S2 and S1.
  
     0.651
plu4177
Pyosin/cloacin_T_dom domain-containing protein; Unnamed protein product; Some similarities with killer protein of pyocin S3 and highly similar to Photorhabdus luminescens unknown protein.
  
     0.621
plu3223
Unnamed protein product; Weakly similar to unknown protein. Putative secreted protein.
  
     0.584
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.