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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4247PNPLA domain-containing protein; Truncated transposase. (335 aa)    
Predicted Functional Partners:
flgM
Negative regulator of flagellin synthesis (Anti-sigma-28 factor) FlgM.
  
     0.659
plu1423
Unnamed protein product; Similar to unknown protein YbfA of Escherichia coli.
  
     0.658
plu4770
Unnamed protein product; Similar to putative membrane protein YiiR of Escherichia coli.
  
     0.598
uspB
Universal stress protein B.
  
   
 0.573
plu3312
Unnamed protein product; Similar to putative alpha helix protein YfhG of Escherichia coli.
  
     0.546
plu2232
UPF0482 protein plu2232; Unnamed protein product; Similar to unknown protein YnfB precursor of Escherichia coli; Belongs to the UPF0482 family.
  
   
 0.540
plu4737
Unnamed protein product; Similar to unknown protein YijD of Escherichia coli.
  
     0.517
yabN
Putative periplasmic binding protein of transport system YabN; Activates the small RNA gene sgrS under glucose-phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain.
  
     0.516
osmY
Osmotically inducible protein Y precursor.
 
     0.515
plu2700
Unnamed protein product; Similar to probable membrane protein YobD of Escherichia coli.
  
     0.511
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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