STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4262Unnamed protein product; Similar to L-ornithine 5-monooxygenase (L-ornithine N5-oxygenase). (441 aa)    
Predicted Functional Partners:
plu4630
AlcB domain-containing protein; Unnamed protein product; Similar to rhizobactin and aerobactin siderophores biosynthesis proteins RhsF and LucC.
 
  
 0.965
plu4621
Unnamed protein product; Similar to alcaligin synthesis protein AlcC and rhizobactin siderophore biosynthesis protein RhsF.
 
  
 0.884
plu4263
Unnamed protein product; Similar to diaminobutyrate--pyruvate aminotransferase (L-diaminobutyric acid transaminase) (diaminobutyrate transaminase) (DABA aminotransferase) (DABA-AT); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.811
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
 
 
 0.784
plu3923
Condensation domain-containing protein; Unnamed protein product; Weakly similar to synthetases (pyoverdine synthetase B, actinomycin synthetase II AcmB, mycosubtilin synthetase chain MycB...).
 
 
 0.739
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
 
 0.715
plu1216
MbtH domain-containing protein; Unnamed protein product; Some similarities with unknown protein.
 
  
 0.709
plu1878
Carrier domain-containing protein; Unnamed protein product; Similar to antibiotic synthetase.
 
 
 0.709
plu2642
Carrier domain-containing protein; Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
 
 
 0.684
plu4628
Unnamed protein product; Similar to L-2,4-diaminobutyrate decarboxylase.
 
  
 0.679
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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