STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plu4274HTH luxR-type domain-containing protein; Unnamed protein product; Similar to monoamine regulon transcriptional regulator MoaR. (219 aa)    
Predicted Functional Partners:
plu1817
HTH luxR-type domain-containing protein; Unnamed protein product; Similar to colanic acid capsular biosynthesis activation protein A (polysaccharide synthesis regulation protein) RcsA of Escherichia coli.
      
 0.540
plu2041
Histidine kinase domain-containing protein; Unnamed protein product; Similar to nitrate/nitrite sensor protein NarX.
  
     0.539
plu3731
Aminotran_1_2 domain-containing protein; Unnamed protein product; Similar to aminotransferases.
    
   0.517
narP
Nitrate/nitrite response regulator protein NarP.
  
     0.514
plu4286
Cupin_3 domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
     0.508
bvgR
Two-component response regulator BvgR protein.
  
     0.425
hpaA
Regulator of the 4HPA-hydroxylase operon.
  
   
 0.421
plu4273
Unnamed protein product; Highly similar to amino acid permease.
  
     0.418
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.