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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
feaBPhenylacetaldehyde dehydrogenase (PAD). (497 aa)    
Predicted Functional Partners:
paaK
Phenylacetate-coenzyme A ligase (Phenylacetyl-CoA ligase) (PA-CoA ligase).
   
  0.916
plu4179
Unnamed protein product; Similar to the phenylacetyl-CoA ligase (in the phenylacetic acid catabolic pathway).
    
  0.915
plu4180
Unnamed protein product; Some similarities with fatty-acyl-CoA reductase.
    
  0.915
plu1231
CN hydrolase domain-containing protein; Unnamed protein product; Highly similar to nitrilase. Putative secreted protein.
   
 0.906
plu3928
Aldedh domain-containing protein; Unnamed protein product; Some similarities with lysine-tRNA ligase LysS.
  
     0.554
plu4286
Cupin_3 domain-containing protein; Unnamed protein product; Similar to unknown protein.
  
    0.527
plu2321
Unnamed protein product; Similar to protein HMWP1 of Yersinia enterocolitica.
  
 
 0.457
gltB
Glutamate synthase [NADPH] large chain precursor (glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain).
  
  
 0.429
plu4287
DAO domain-containing protein; Unnamed protein product; Highly similar to probable oxidoreductase.
  
  
 0.418
plu1880
Unnamed protein product; Similar to proteins involved in antibiotic biosynthesis. Putative transmembrane protein.
  
 
 0.414
Your Current Organism:
Photorhabdus laumondii
NCBI taxonomy Id: 243265
Other names: P. laumondii subsp. laumondii TTO1, Photorhabdus laumondii subsp. laumondii TTO1, Photorhabdus luminescens subsp. laumondii TTO1
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